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7TMIR |
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7-TM inverted repeat |
ABC |
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ATP–binding cassette (transporter) |
AbgT |
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p-Aminobenzoyl-glutamate transporter |
ADP |
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Adenosine diphosphate |
AMBER |
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Assisted model building with energy refinement |
aMD |
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Accelerated molecular dynamics |
AMP |
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Antimicrobial peptide |
APC |
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Amino acid-polyamine-organocation (transporter) |
AQP |
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Aquaporin |
ARM |
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Armadillo repeat motif |
ATP |
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Adenosine triphosphate |
BAF |
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Barrier-to-autointegration factor |
BCA |
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Bicinchoninic acid |
BCCT |
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Betaine-choline-carnitine-transporter |
BD |
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Brownian dynamics |
BHK |
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Baby hamster kidney |
cAMP |
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Cyclic adenosine monophosphate |
CCCP |
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Carbonyl cyanide m-chlorophenyl hydrazone |
CD |
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Circular dichroism (spectroscopy) |
CDG |
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Congenital disorders of glycosylation |
CGMD |
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Coarse grained molecular dynamics |
CHARMM |
Chemistry at Harvard Macromolecular Mechanics |
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CMC |
Critical micellar concentration |
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CMT |
Critical micellular concentration |
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CMM-CG |
Center for Molecular Modeling Coarse-Grained |
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Co-IP |
Co-immunoprecipitation |
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CT |
Cholera toxin |
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DAPI |
4′,6-Diamidino-2-phenylindole |
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DDM |
n-Dodecyl β-D-maltoside |
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DEER |
Double electron-electron resonance (spectroscopy) |
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DHA1 |
Drug/H+ antiporter-1 |
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DinF |
DNA damage-inducible protein F |
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DM |
Diabetes mellitus |
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DMPC |
Dimyristoylphosphatidylcholine |
DMT |
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Drug/metabolite transporter |
DMSO |
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Dimethyl sulphoxide |
DNA |
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Deoxyribonucleic acid |
DPPC |
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Dipalmitoylphosphatidylcholine |
DSSP |
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Define secondary structure of proteins |
DXC |
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Deoxycholate |
EC |
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Extracellular |
ECM |
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Extracellular matrix |
EDTA |
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Ethylenediaminetetraacetic acid |
EFPA |
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Enhancing functional protein accumulation |
EGF |
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Epidermal growth factor |
EM |
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Electron microscopy |
EMT |
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Epithelial–tesenchymal transition |
ER |
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Endoplasmic reticulum |
EVB |
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Empirical valence bond |
FOXO |
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Forkhead family box O (transcription factors) |
FRAP |
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Fluorescence recovery after photobleaching (microscopy) |
FRB |
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FKBP12/rapamycin-binding |
FRET |
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Förster resonance energy transfer |
FSM |
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Flexible surface model |
GCMC |
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Grand canonical Monte Carlo |
GDM |
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Gestational diabetes mellitus |
GFP |
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Green fluorescent protein |
GH |
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Growth hormone |
GLUT |
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Glucose transporter |
gp210 |
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Glycoprotein-210 (antibody) |
GPCR |
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G–Protein coupled receptor |
Grb2 |
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Growth factor–bound protein 2 |
GROMOS |
GROningen MOlecular Simulation |
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GSK3 β |
Glycogen synthase kinase 3β |
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HILO |
Highly inclined and laminated optical sheet (microscopy) |
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HIV |
Human immunodeficiency virus |
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HLB |
Hydrophile-lipophile balance |
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HPr |
Heat-stable protein |
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HyR |
Hybrid receptor |
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IC |
Intracellular |
IF |
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Inward facing (conformation) |
IGF |
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Insulin-like growth factor |
IGFBP |
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Insulin-like growth factor binding protein |
IMAC |
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Immobilised metal affinity chromatography |
IMP |
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Integral membrane protein |
IPTG |
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Isopropyl β-D-1-thiogalactopyranoside |
INM |
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Inner nuclear membrane |
INM-SM |
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Inner nuclear membrane sorting motif |
IR |
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Insulin receptor |
IRS |
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Insulin receptor substrate |
IUGR |
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Intrauterine growth restriction |
KEGG |
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Kyoto Encyclopedia of Genes and Genomes |
KASH |
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Klarsicht, ANC-1, syne homology |
LB |
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Luria-Bertani |
LBR |
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Lamin B receptor |
LDAO |
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Lauryldimethylamine oxide |
LEM |
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Lamin-associated protein [LAP]2, emerin, MAN1 |
MATE |
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Multidrug and toxic compound extrusion |
MD |
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Molecular dynamics |
MDR1 |
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Multidrug resistance protein 1 |
MES |
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2-(N-Morpholino)ethanesulfonic acid |
MFS |
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Major facilitator superfamily |
MMP |
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Matrix metalloproteinase |
MRE |
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Mean residue ellipiticity |
MS-CG |
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Multiscale coarse grained |
MtlA |
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Mannitol-specific enzyme IICBA |
MtlD |
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Mannitol-1-phosphate dehydrogenase |
MWCO |
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Molecular weight cut off |
NAT |
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Nucleobase ascorbate transporter |
NBD |
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Nucleotide binding domain |
NCS1 |
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Nucleobase-cation-symporter 1 |
NE |
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Nuclear envelope |
NETs |
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Nuclear envelope pransmembrane proteins |
NLS |
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Nuclear localization signal |
NMR |
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Nuclear magnetic resonance |
NPC |
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Nuclear pore complexes |
NSS |
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Neurotransmitter sodium symporter |
Nup |
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Nucleoporin |
ODV |
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Occlusion derived virus |
OF |
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Outward facing (conformation) |
OHS |
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Oligosaccharide/H+ symporter |
ONM |
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Outer nuclear membrane |
PACE |
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Proteobacterial antimicrobial compound efflux |
PBC |
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Periodic boundary conditions |
PC |
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Phosphatidylcholine |
PCR |
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Polymerase chain reaction |
PDB |
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Protein Data Bank |
PE |
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Preeclampsia |
PEP |
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Phosphoenol pyruvate |
PG |
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Phosphatidylglycerol |
POPE |
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1-Palmitoyl-2-oleoyl-sn-glycero-3phosphatidylethanolamine |
PTEN |
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Phosphatase and tensin |
PTM |
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Post–translational modification |
PTS |
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Phosphoenolpyruvate-dependent phospotransferase |
QM |
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Quantum mechanical |
RDF |
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Radial distribution functions |
RMSF |
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Root mean square fluctuations |
RNAi |
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RNA interference |
RND |
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Resistance-nodulation-division |
ROS |
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Reactive oxygen species |
S6K |
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S6 kinase |
SAXS |
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Small-angle X-ray scattering |
SBGP |
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Single binding center gated (model) |
SDS |
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Sodium dodecyl sulphate |
SDS-PAGE |
Sodium dodecyl sulphate polyacrylamide gel electrophoresis |
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SHC |
Src homology collagen |
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SMA |
Styrene maleic acid |
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SMALP |
Styrene maleic acid lipid particle |
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smFRAP |
Single-molecul |